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Plant Transcription
Factor Database
v4.0
Previous version:
v3.0
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Gh_D08G0879 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family | bZIP | ||||||||
Protein Properties | Length: 92aa MW: 10752.2 Da PI: 8.7411 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 35.2 | 2.7e-11 | 45 | 87 | 4 | 46 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 k+++r +NR A rsR+RKk++++ Le k+ Le+e ++L Gh_D08G0879 45 AKKQKRQLRNRDAVVRSRERKKMYVKDLEMKSRYLEGECRRLS 87 59************************************99886 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 1.8E-10 | 40 | 87 | No hit | No description |
PROSITE profile | PS50217 | 9.071 | 44 | 86 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 6.9E-10 | 45 | 87 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.81E-9 | 46 | 89 | No hit | No description |
CDD | cd14704 | 3.35E-11 | 47 | 92 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 92 aa Download sequence Send to blast |
METLEDKTDE NMFPPLGSDI VGVDGGDLHK QSQTHTDVDK DNPIAKKQKR QLRNRDAVVR 60 SRERKKMYVK DLEMKSRYLE GECRRLSHVL HC |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Ghi.2157 | 1e-83 | boll| ovule| root| stem |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012447655.1 | 1e-41 | PREDICTED: bZIP transcription factor 60-like | ||||
TrEMBL | A0A0D2MW25 | 5e-49 | A0A0D2MW25_G | ||||
STRING | GLYMA02G19754.1 | 2e-22 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM4634 | 28 | 48 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G42990.1 | 7e-10 | basic region/leucine zipper motif 60 |